![]() While we're at it, let's change the colors ( col=), remove the suggestive and genome-wide significance lines, and supply our own labels for the chromosomes: manhattan(gwasResults, main = "Manhattan Plot", ylim = c(0, 10), cex = 0.6, cex.axis = 0.9,Ĭol = c("blue4", "orange3"), suggestiveline = F, genomewideline = F, chrlabs = c(1:20, Let's add a title ( main=), increase the y-axis limit ( ylim=), reduce the point size to 60% ( cex=), and reduce the font size of the axis labels to 90% ( cex.axis=). We can also pass in other graphical parameters. How many SNPs on each chromosome? as.ame(table(gwasResults$CHR)) Take a look at the data: str(gwasResults) The gwasResults ame included with the package has simulated results for 16,470 SNPs on 22 chromosomes. The qqman package includes functions for creating manhattan plots and q-q plots from GWAS results. ![]() What Did We Say before Texting and Social Media?īefore the digital era, we might have said something like "Stop It," "Stop Moaning," or "Question For You" instead of using QQ.Intro to the qqman package Intro to the qqman package Initialisms are different to acronyms, which are spoken like words. Therefore, it is classified as an initialism abbreviation. When used with the meaning "Quick Question," QQ is pronounced using its individual letters (i.e., "Kew Kew"). Emojis are used to add subtle emotional emphasis to sentences. When used to represent "Crying Eyes," QQ is a textual representation of an emoji. Initially, cyber term terms were introduced for brevity, but, particularly with the advent of predictive texting and on-screen keyboards, they are now mostly employed for fun. When used with the meaning "Quit," QQ is a cyber term. Nick: QQ, what time does the match start?.Daryl: I hate my boss! I can't carry on like this.Here are examples of QQ being used in conversations: Youku - A video hosting and streaming service. ![]()
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